nanome.api.structure.complex module¶

class Complex[source]¶

Bases: nanome._internal.structure.models._Complex, nanome.api.structure._deprecated.ComplexDeprecated, nanome.api.structure.base.Base

Represents a Complex that contains molecules.

add_molecule(molecule)[source]¶

Add a molecule to this complex

Parameters:	molecule (`Molecule`) – Molecule to add to the chain

static align_origins(target_complex, *other_complexes)[source]¶

atoms¶: The list of atoms within this complex

bonds¶: The list of bonds within this complex

box_label¶

Represents the label on the box surrounding the complex

Type:	`str`

boxed¶

Represents if this complex is boxed/bordered in Nanome.

Type:	`bool`

chains¶: The list of chains within this complex

computing¶

convert_to_conformers(force_conformers=None)[source]¶

convert_to_frames()[source]¶

current_frame¶

Represents the current animation frame the complex is in.

Type:	`int`

full_name¶

Represents the full name of the complex with its tags and name

Type:	`str`

get_all_selected()[source]¶

get_complex_to_workspace_matrix()[source]¶

get_selected()[source]¶

get_workspace_to_complex_matrix()[source]¶

index_tag¶

io = <nanome.api.structure.io.complex_io.ComplexIO object>¶

locked¶

Represents if this complex is locked and unmovable in Nanome.

Type:	`bool`

molecules¶: The list of molecules within this complex

name¶

Represents the name of the complex

Type:	`str`

position¶

Position of the complex

Type:	`Vector3`

register_complex_updated_callback(callback)[source]¶

register_selection_changed_callback(callback)[source]¶

remarks¶

remarks section of the complex file

Type:

class:	dict

remove_molecule(molecule)[source]¶

Remove a molecule from this complex

Parameters:	molecule (`Molecule`) – Molecule to remove from the chain

residues¶: The list of residues within this complex

rotation¶

Rotation of the complex

Type:	`Quaternion`

set_all_selected(value)[source]¶

set_current_frame(value)[source]¶

set_surface_needs_redraw()[source]¶

split_tag¶

visible¶

Represents if this complex is visible in Nanome.

Type:	`bool`